Basic Information
Locus ID:
nbisL1-mrna-12197
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 24725280 | 24729644 | - | nbisL1-mrna-12197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.73 | 49,236.12 Da | 50.13 | 82.49 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 282 | 386 | 1.8E-7 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 175 | 281 | 5.1E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 156 | 394 | 1.68E-50 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 155 | 247 | 3.1E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 280 | 409 | 4.5E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 172 | 437 | 11.298026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 178 | 201 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 437 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_016693871.1 | probable receptor-like protein kinase At5g18500 [Gossypium hirsutum] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1R3GKF7 | Protein kinase domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_34525 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology