Basic Information
Locus ID:
nbisL1-mrna-12166
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
MUB1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 7803743 | 7805540 | + | nbisL1-mrna-12166 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 12,542.26 Da | 37.20 | 91.62 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 95 | 5.56743E-49 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 115 | 7.6E-40 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 4 | 99 | 1.7E-24 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 101 | 3.5E-40 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 117 | 2.5E-45 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 74 | 8.85091 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15460.1 | membrane-anchored ubiquitin-fold protein 2. | 0 |
| RefSeq | XP_021805850.1 | membrane-anchored ubiquitin-fold protein 2 [Prunus avium] | 0 |
| Q8LCS8 | Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5RVX6 | Membrane-anchored ubiquitin-fold protein OS=Prunus avium OX=42229 GN=LOC110749939 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology