Basic Information
Locus ID:
nbisL1-mrna-12132
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 23573389 | 23578562 | - | nbisL1-mrna-12132 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 59,046.55 Da | 38.63 | 111.48 | 0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 22 | 436 | 2.3E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 139 | 191 | 5.3E-15 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 20 | 444 | 1.6E-75 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 78 | 89 | 5.6E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 107 | 115 | 5.6E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 147 | 157 | 5.6E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 92 | 106 | 5.6E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_016719603.1 | sodium/hydrogen exchanger 2 [Gossypium hirsutum] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8M224 | Sodium/hydrogen exchanger OS=Gossypium hirsutum OX=3635 GN=LOC107932164 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology