Basic Information
Locus ID:
nbisL1-mrna-12109
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Oxidation resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000298F_pilon | 3242660 | 3246585 | - | nbisL1-mrna-12109 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 41,201.85 Da | 48.12 | 77.37 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 213 | 350 | 1.4E-29 | IPR006571 |
| SMART | SM00584 | 109ultra | 187 | 351 | 2.5E-31 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 188 | 351 | 27.176903 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 45 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39870.1 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_012090799.1 | oxidation resistance protein 1 [Jatropha curcas] | 0 |
| Q9VIH7 | GTPase-activating protein skywalker OS=Drosophila melanogaster OX=7227 GN=sky PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2K5V0 | TLDc domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology