Basic Information
Locus ID:
nbisL1-mrna-12100
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001602F_pilon | 95547 | 99516 | - | nbisL1-mrna-12100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 76,086.79 Da | 39.66 | 83.50 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 336 | 648 | 1.56006E-118 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 306 | 634 | 1.8E-89 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 337 | 659 | 1.88E-63 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 348 | 656 | 1.4E-40 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 123 | - | - |
| Coils | Coil | Coil | 267 | 287 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_012082218.1 | probable galacturonosyltransferase 4 isoform X1 [Jatropha curcas] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2LNF7 | Hexosyltransferase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology