Basic Information
Locus ID:
nbisL1-mrna-12054
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Receptor-like cytosolic serine threonine-protein kinase RBK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000298F_pilon | 2821382 | 2825403 | + | nbisL1-mrna-12054 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 48,163.96 Da | 33.61 | 90.16 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 157 | 331 | 2.8E-21 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 131 | 333 | 5.38E-40 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 114 | 230 | 1.5E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 280 | 334 | 7.2E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 335 | 405 | 1.9E-6 | - |
| SMART | SM00220 | serkin_6 | 153 | 390 | 6.3E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 153 | 436 | 21.304897 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 316 | 328 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 159 | 188 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021662721.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Hevea brasiliensis] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JTB5 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology