Basic Information
Locus ID:
nbisL1-mrna-12047
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 22509334 | 22515154 | - | nbisL1-mrna-12047 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 117,156.09 Da | 51.79 | 67.92 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 823 | 1045 | 7.03188E-84 | - |
| CDD | cd06410 | PB1_UP2 | 186 | 281 | 3.74645E-46 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 819 | 1044 | 5.1E-51 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 198 | 282 | 4.2E-21 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 198 | 286 | 9.25E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 810 | 1045 | 5.82E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 797 | 1048 | 7.1E-66 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 201 | 284 | 6.2E-15 | - |
| SMART | SM00666 | PB1_new | 197 | 284 | 1.6E-32 | IPR000270 |
| SMART | SM00220 | serkin_6 | 817 | 1055 | 3.5E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 817 | 1055 | 38.972397 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 952 | 964 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 823 | 844 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 746 | 796 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 642 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 760 | 787 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_040944630.1 | probable serine/threonine-protein kinase DDB_G0278521 [Gossypium hirsutum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2XP70 | Protein kinase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111505pilonHSYRG00001 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology