Basic Information
Locus ID:
nbisL1-mrna-120
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 618649 | 621967 | + | nbisL1-mrna-120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 71,988.82 Da | 38.00 | 81.46 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 328 | 590 | 2.07133E-91 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 154 | 239 | 3.2E-13 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 52 | 129 | 2.8E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 325 | 590 | 7.1E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 306 | 617 | 1.48E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 398 | 598 | 4.4E-59 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 242 | 4.4E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 38 | 131 | 8.8E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 283 | 397 | 7.7E-31 | - |
| SMART | SM00220 | serkin_6 | 322 | 592 | 2.3E-23 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 27 | 131 | 13.610282 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 144 | 242 | 14.85042 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 606 | 35.212753 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 350 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 443 | 455 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021593520.1 | cysteine-rich receptor-like protein kinase 42 isoform X2 [Manihot esculenta] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2K1V8 | Cysteine-rich receptor-like protein kinase 42 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology