Basic Information
Locus ID:
nbisL1-mrna-11966
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002125F_pilon | 2570772 | 2581299 | + | nbisL1-mrna-11966 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 154,331.25 Da | 44.95 | 88.09 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 103 | 406 | 1.6E-93 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 97 | 425 | 1.42E-95 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 91 | 421 | 2.7E-113 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 95 | 423 | 4.5E-114 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 97 | 396 | 92.618446 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 330 | 341 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 169 | 190 | 1.9E-33 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 331 | 349 | 1.9E-33 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 384 | 405 | 1.9E-33 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 298 | 315 | 1.9E-33 | IPR001752 |
| Coils | Coil | Coil | 1123 | 1143 | - | - |
| Coils | Coil | Coil | 684 | 711 | - | - |
| Coils | Coil | Coil | 775 | 816 | - | - |
| Coils | Coil | Coil | 1193 | 1213 | - | - |
| Coils | Coil | Coil | 1075 | 1109 | - | - |
| Coils | Coil | Coil | 1145 | 1172 | - | - |
| Coils | Coil | Coil | 660 | 680 | - | - |
| Coils | Coil | Coil | 544 | 564 | - | - |
| Coils | Coil | Coil | 853 | 880 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_021690187.1 | kinesin-like protein KIN-12E [Hevea brasiliensis] | 0 |
| F4J1U4 | Kinesin-like protein KIN-12E OS=Arabidopsis thaliana OX=3702 GN=KIN12E PE=3 SV=1 | 0 | |
| TrEMBL | B9SS38 | Kinesin, putative OS=Ricinus communis OX=3988 GN=RCOM_0395650 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology