Basic Information
Locus ID:
nbisL1-mrna-11915
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 15942568 | 15950377 | + | nbisL1-mrna-11915 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 87,266.42 Da | 49.22 | 88.86 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 512 | 783 | 4.6E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 50 | 89 | 1.5E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 488 | 783 | 1.01E-69 | IPR011009 |
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 454 | 464 | 2.46E-5 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 256 | 5.83E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 474 | 586 | 1.5E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 181 | 7.4E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 587 | 794 | 7.2E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 270 | 7.9E-16 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 509 | 787 | 33.813488 | IPR000719 |
| PRINTS | PR01217 | Proline rich extensin signature | 434 | 451 | 2.8E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 277 | 293 | 2.8E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 262 | 274 | 2.8E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 452 | 477 | 2.8E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 289 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_043805600.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Manihot esculenta] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K7E2 | Protein STRUBBELIG-RECEPTOR FAMILY 3-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology