Basic Information
Locus ID:
nbisL1-mrna-11893
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15217765 | 15226100 | + | nbisL1-mrna-11893 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 85,182.21 Da | 40.89 | 73.62 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 31 | 285 | 2.15396E-103 | - |
| Pfam | PF02365 | No apical meristem (NAM) protein | 419 | 560 | 3.0E-19 | IPR003441 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 28 | 285 | 1.6E-56 | IPR001245 |
| SUPERFAMILY | SSF101941 | NAC domain | 407 | 579 | 3.01E-33 | IPR036093 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 311 | 4.18E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 307 | 4.3E-51 | - |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 427 | 584 | 6.1E-27 | IPR036093 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 104 | 2.3E-21 | - |
| SMART | SM00220 | serkin_6 | 25 | 289 | 5.9E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 289 | 42.110146 | IPR000719 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 418 | 579 | 29.048872 | IPR003441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 145 | 157 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 31 | 52 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 618 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021595395.1 | serine/threonine-protein kinase STY13 [Manihot esculenta] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6KW68 | Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_018368 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology