Basic Information
Locus ID:
nbisL1-mrna-11889
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Protein kinase PVPK-1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15195799 | 15199057 | + | nbisL1-mrna-11889 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 74,535.58 Da | 54.42 | 75.52 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 280 | 638 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 282 | 433 | 1.2E-36 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 515 | 618 | 3.3E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 255 | 642 | 1.71E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 280 | 364 | 2.9E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 365 | 464 | 2.9E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 513 | 636 | 6.2E-36 | - |
| SMART | SM00220 | serkin_6 | 281 | 618 | 5.4E-86 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 281 | 618 | 44.21611 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 402 | 414 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27580.1 | Protein kinase superfamily protein. a member of a subfamily of Ser/Thr PKs in plants. | 0 |
| RefSeq | XP_024442641.1 | protein kinase PVPK-1 [Populus trichocarpa] | 0 |
| P15792 | Protein kinase PVPK-1 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2ITM8 | Protein kinase PVPK-1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology