Basic Information
Locus ID:
nbisL1-mrna-11876
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15103025 | 15105123 | - | nbisL1-mrna-11876 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 53,739.39 Da | 31.45 | 82.65 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 325 | 474 | 1.8E-29 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 55 | 129 | 1.0E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 154 | 239 | 2.9E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 301 | 486 | 1.89E-52 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 139 | 242 | 4.0E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 40 | 131 | 4.7E-16 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 398 | 486 | 1.0E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 281 | 397 | 2.0E-30 | - |
| SMART | SM00220 | serkin_6 | 322 | 481 | 4.1E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 486 | 28.682846 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 144 | 242 | 14.397815 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 31 | 131 | 14.379711 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 443 | 455 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 350 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.3 | - | 0 |
| RefSeq | XP_021670466.1 | cysteine-rich receptor-like protein kinase 42 [Hevea brasiliensis] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2K1V8 | Cysteine-rich receptor-like protein kinase 42 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology