Basic Information
Locus ID:
nbisL1-mrna-11873
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15086864 | 15089610 | - | nbisL1-mrna-11873 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.47 | 54,760.35 Da | 41.45 | 77.89 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 157 | 242 | 3.6E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 45 | 132 | 1.2E-11 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 330 | 436 | 4.0E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 465 | 5.79E-20 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 245 | 9.8E-13 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 304 | 445 | 2.3E-25 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 38 | 134 | 1.2E-15 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 34 | 134 | 14.886628 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 147 | 245 | 14.216773 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 502 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021593520.1 | cysteine-rich receptor-like protein kinase 42 isoform X2 [Manihot esculenta] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2K1V8 | Cysteine-rich receptor-like protein kinase 42 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology