Basic Information
Locus ID:
nbisL1-mrna-11841
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 20296216 | 20298705 | - | nbisL1-mrna-11841 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 74,485.93 Da | 29.50 | 94.56 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 412 | 671 | 2.43552E-87 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.1E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 412 | 671 | 5.2E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 671 | 1.17E-53 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 235 | 8.69E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 138 | 7.0E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 484 | 677 | 3.7E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 252 | 4.7E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 483 | 3.3E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 405 | 678 | 26.36487 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039042866.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Hibiscus syriacus] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2Y2D6 | Protein kinase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112857pilonHSYRG00101 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology