Basic Information
Locus ID:
nbisL1-mrna-11829
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
lysM domain receptor-like kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000298F_pilon | 1206126 | 1208075 | + | nbisL1-mrna-11829 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 71,192.21 Da | 39.51 | 94.96 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 120 | 165 | 0.089 | IPR018392 |
| Pfam | PF01476 | LysM domain | 189 | 229 | 0.066 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 380 | 620 | 4.1E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 623 | 1.24E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 422 | 640 | 1.0E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 327 | 420 | 1.3E-14 | - |
| SMART | SM00220 | serkin_6 | 329 | 623 | 1.1E-14 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 279 | 623 | 30.60507 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 184 | 228 | 8.956945 | IPR018392 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 467 | 479 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 255 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_002533278.1 | lysM domain receptor-like kinase 4 [Ricinus communis] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | B9T4V9 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis OX=3988 GN=RCOM_0411660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology