halophFGD

Basic Information

Locus ID: nbisL1-mrna-11825

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Description: calcium-dependent protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	20139263	20139817	+	nbisL1-mrna-11825

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.14	20,932.89 Da	33.99	94.29	-0.29

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	44	177	7.5E-30	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	39	174	2.49E-38	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	32	180	4.0E-37	-
SMART	SM00220	serkin_6	42	183	2.5E-8	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	42	184	23.96209	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	48	71	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04515 (calcium/calmodulin-dependent protein kinase (CaM kinase) II [EC:2.7.11.17])

Pathway:

ko04012 (ErbB signaling pathway) map04012 (ErbB signaling pathway) ko04020 (Calcium signaling pathway) map04020 (Calcium signaling pathway) ko04024 (cAMP signaling pathway) map04024 (cAMP signaling pathway) ko04066 (HIF-1 signaling pathway) map04066 (HIF-1 signaling pathway) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis) map04217 (Necroptosis) ko04310 (Wnt signaling pathway) map04310 (Wnt signaling pathway) ko04745 (Phototransduction - fly) map04745 (Phototransduction - fly) ko04750 (Inflammatory mediator regulation of TRP channels) map04750 (Inflammatory mediator regulation of TRP channels) ko04916 (Melanogenesis) map04916 (Melanogenesis)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G12580.1	phosphoenolpyruvate carboxylase-related kinase 1.
RefSeq	XP_012440214.1	calcium-dependent protein kinase 26 [Gossypium raimondii]
Swiss-Prot	Q9M9V8	Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1
TrEMBL	A0A0D2UB53	Protein kinase domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_008G280900 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg14042, jg37166
Aizoaceae	Mesembryanthemum crystallinum	1	gene_16094
Amaranthaceae	Atriplex hortensis	1	Ah018978
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg15489, Sbi_jg56301
Amaranthaceae	Salicornia europaea	1	Seu_jg26767
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00006602
Amaranthaceae	Suaeda glauca	2	Sgl02066, Sgl07219
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000000013, gene:ENSEOMG00000028669 ... gene:ENSEOMG00000044757
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.3AG0002210, CQ.Regalona.r1.3BG0002330
Anacardiaceae	Pistacia vera	2	pistato.v30143560, pistato.v30182140
Apiaceae	Apium graveolens	1	Ag11G03909
Arecaceae	Cocos nucifera	2	COCNU_09G001230, scaffold018491G000010
Arecaceae	Phoenix dactylifera	2	gene-LOC103721378, gene-LOC103723343
Asparagaceae	Asparagus officinalis	1	AsparagusV1_08.425.V1.1
Asteraceae	Flaveria trinervia	2	Ftri17G26653, Ftri6G23869
Brassicaceae	Arabidopsis thaliana	1	AT1G12580.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10007365m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp1g11180.v2.2
Brassicaceae	Brassica nigra	2	BniB02g007500.2N, BniB03g005210.2N
Casuarinaceae	Casuarina glauca	1	Cgl02G2143
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno17g01100
Dunaliellaceae	Dunaliella salina	3	Dusal.0190s00004.v1.0, Dusal.0529s00009.v1.0 ... Dusal.0744s00008.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate01g07770
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-11825
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.2211, evm.TU.LG10.1332
Plantaginaceae	Plantago ovata	1	Pov_00040897
Plumbaginaceae	Limonium bicolor	1	Lb3G21010
Poaceae	Echinochloa crus-galli	3	AH06.469, BH06.147, CH06.142
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_6AG0506870, gene-QOZ80_6BG0458570
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.7HG0642750.1
Poaceae	Oryza coarctata	2	Oco11G001210, Oco12G001120
Poaceae	Oryza sativa	1	LOC_Os06g03682.1
Poaceae	Paspalum vaginatum	1	gene-BS78_10G019400
Poaceae	Sporobolus alterniflorus	3	Chr11G024070, Chr14G000960, Chr21G000050
Poaceae	Thinopyrum elongatum	1	Tel7E01G124700
Poaceae	Triticum dicoccoides	2	gene_TRIDC4AG063810, gene_TRIDC7AG006080
Poaceae	Triticum aestivum	3	TraesCS4A02G432300.1, TraesCS7D02G052900.1 ... TraesCSU02G091900.1
Poaceae	Zea mays	1	Zm00001eb269440_P001
Poaceae	Zoysia japonica	2	nbis-gene-40279, nbis-gene-51178
Poaceae	Zoysia macrostachya	2	Zma_g29021, Zma_g31262
Portulacaceae	Portulaca oleracea	1	evm.TU.LG11.1583
Posidoniaceae	Posidonia oceanica	1	gene.Posoc10g10460
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_11_RagTag.1330 ... evm.TU.Scaffold_14_RagTag.243
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-12634, nbisL1-mrna-18139, nbisL1-mrna-29177
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-1873, nbisL1-mrna-3011, nbisL1-mrna-3905 ... nbisL1-mrna-6823
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-12903, nbisL1-mrna-2118, nbisL1-mrna-8470
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000007l.225, evm.TU.utg000008l.103 ... evm.TU.utg000010l.340
Rhizophoraceae	Kandelia obovata	3	Maker00000674, Maker00009093, Maker00018439
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-1045, nbisL1-mrna-16079, nbisL1-mrna-23234 ... nbisL1-mrna-2382
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-10841, nbisL1-mrna-20633, nbisL1-mrna-6235
Salicaceae	Populus euphratica	3	populus_peu29222, populus_peu30582, populus_peu34331
Solanaceae	Lycium barbarum	1	gene-LOC132631820
Solanaceae	Solanum pennellii	1	gene-LOC107015027
Tamaricaceae	Reaumuria soongarica	1	gene_4126
Tamaricaceae	Tamarix chinensis	1	TC05G0312