Basic Information
Locus ID:
nbisL1-mrna-1181
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000150F_pilon | 4510384 | 4514828 | - | nbisL1-mrna-1181 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 111,835.46 Da | 33.30 | 102.91 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 573 | 594 | 1.3 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 144 | 202 | 1.4E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 4.6E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 288 | 310 | 0.64 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 691 | 968 | 8.3E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 477 | 586 | 5.31E-17 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 285 | 7.48E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 212 | 515 | 2.55E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 670 | 970 | 2.16E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 182 | 3.4E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 986 | 8.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 285 | 1.7E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 672 | 767 | 6.5E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 356 | 624 | 2.1E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 355 | 1.4E-17 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 571 | 595 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 190 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 8.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 570 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 689 | 971 | 3.1E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 310 | 334 | 280.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 689 | 978 | 37.163246 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 695 | 718 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_011008121.1 | PREDICTED: receptor-like protein kinase 5 [Populus euphratica] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KLD6 | Receptor-like protein kinase 5 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology