Basic Information
Locus ID:
nbisL1-mrna-11777
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 19719335 | 19723512 | - | nbisL1-mrna-11777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 84,592.49 Da | 38.69 | 85.45 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 53 | 241 | 1.09241E-110 | - |
| Pfam | PF00183 | Hsp90 protein | 223 | 729 | 1.2E-234 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 66 | 220 | 4.5E-15 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 44 | 252 | 5.71E-75 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 580 | 702 | 3.4E-38 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 301 | 556 | 6.14E-110 | IPR020568 |
| Gene3D | G3DSA:3.40.50.11260 | - | 469 | 555 | 4.1E-42 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 556 | 707 | 2.0E-65 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 41 | 267 | 3.5E-97 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 300 | 468 | 1.2E-86 | - |
| SMART | SM00387 | HKATPase_4 | 66 | 221 | 5.0E-10 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 17 | 737 | 2.0E-261 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 64 | 73 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 65 | 87 | 3.8E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 227 | 245 | 3.8E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 114 | 131 | 3.8E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 157 | 179 | 3.8E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 132 | 149 | 3.8E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 209 | 226 | 3.8E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 44 | 64 | 3.8E-84 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 41 | 703 | 27.34911 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 737 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 286 | - | - |
| Coils | Coil | Coil | 561 | 581 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_017637430.1 | PREDICTED: heat shock protein 83 isoform X1 [Gossypium arboreum] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B6UP72 | Heat shock protein 83 OS=Gossypium australe OX=47621 GN=hsp90a.1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology