Basic Information
Locus ID:
nbisL1-mrna-11775
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
3-phosphatase and dual-specificity protein phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 14193801 | 14196279 | + | nbisL1-mrna-11775 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 48,194.97 Da | 52.74 | 76.32 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14509 | PTP_PTEN | 55 | 210 | 9.94798E-91 | IPR045101 |
| Pfam | PF00782 | Dual specificity phosphatase, catalytic domain | 125 | 189 | 4.8E-6 | IPR000340 |
| Pfam | PF10409 | C2 domain of PTEN tumour-suppressor protein | 322 | 397 | 5.2E-10 | IPR014020 |
| SUPERFAMILY | SSF52799 | (Phosphotyrosine protein) phosphatases II | 53 | 211 | 1.07E-41 | IPR029021 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 326 | 399 | 1.31E-14 | IPR035892 |
| Gene3D | G3DSA:3.90.190.10 | Protein tyrosine phosphatase superfamily | 32 | 216 | 8.0E-71 | IPR029021 |
| Gene3D | G3DSA:2.60.40.1110 | - | 275 | 402 | 3.3E-10 | - |
| SMART | SM01326 | PTEN_C2_2 | 228 | 399 | 2.5E-10 | IPR014020 |
| ProSiteProfiles | PS50056 | Tyrosine specific protein phosphatases domain profile. | 133 | 188 | 11.91537 | IPR000387 |
| ProSiteProfiles | PS51181 | Phosphatase tensin-type domain profile. | 45 | 214 | 29.346567 | IPR029023 |
| ProSiteProfiles | PS51182 | C2 tensin-type domain profile. | 245 | 400 | 13.762133 | IPR014020 |
| ProSitePatterns | PS00383 | Tyrosine specific protein phosphatases active site. | 153 | 163 | - | IPR016130 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00562 (Inositol phosphate metabolism)
map00562 (Inositol phosphate metabolism)
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04070 (Phosphatidylinositol signaling system)
map04070 (Phosphatidylinositol signaling system)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
map04115 (p53 signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04212 (Longevity regulating pathway - worm)
map04212 (Longevity regulating pathway - worm)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39400.1 | Calcium/lipid-binding (CaLB) phosphatase. | 0 |
| RefSeq | XP_038696496.1 | phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1-like isoform X1 [Tripterygium wilfordii] | 0 |
| Q9FLZ5 | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1 OS=Arabidopsis thaliana OX=3702 GN=PTEN1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J7BUS4 | Calcium/lipid-binding (CaLB) phosphatase OS=Tripterygium wilfordii OX=458696 GN=HS088_TW23G00109 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg40221 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30194150 |
| Arecaceae | Cocos nucifera | 1 | COCNU_05G002110 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103711183 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.1399.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G30120, Ftri18G13125 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G39400.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10027783m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g02580.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g028260.2N, BniB06g060170.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0362 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0321 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g10710 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.250 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028024 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G13062 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g20080 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.324 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-15182 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14779 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-274 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.183 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00007868 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-11775 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-17297 |
| Salicaceae | Populus euphratica | 2 | populus_peu00638, populus_peu24575 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132618433 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107013932 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7277 |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G1207 |
| Zosteraceae | Zostera marina | 1 | Zosma06g28190.v3.1 |