halophFGD

Basic Information

Locus ID: nbisL1-mrna-11762

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Description: G-type lectin S-receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	19592904	19593480	-	nbisL1-mrna-11762

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.68	17,728.19 Da	19.06	85.28	0.21

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	98	157	4.3E-7	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	98	159	9.51E-15	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	97	161	1.6E-21	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	89	161	8.810442	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G24080.1	Protein kinase superfamily protein.
RefSeq	XP_022738918.1	G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 isoform X2 [Durio zibethinus]
Swiss-Prot	Q9FLV4	G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana OX=3702 GN=At5g24080 PE=2 SV=1
TrEMBL	A0A6A3D4L7	Receptor-like serine/threonine-protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000002pilonHSYRG00221 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg38350
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000043383
Asteraceae	Flaveria trinervia	1	Ftri13G02016
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-11762
Poaceae	Thinopyrum elongatum	1	Tel3E01G638900