Basic Information
Locus ID:
nbisL1-mrna-11735
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 19324209 | 19325863 | + | nbisL1-mrna-11735 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 59,381.46 Da | 40.33 | 72.58 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 1.0739E-16 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 8.4E-18 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 287 | 461 | 3.4E-62 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 59 | 130 | 5.89E-20 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 64 | 181 | 7.0E-20 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 4.0E-18 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 15.88436 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 2.6E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 2.6E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 2.6E-11 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 179 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.1 | DNAJ heat shock N-terminal domain-containing protein. | 0 |
| RefSeq | XP_017615738.1 | PREDICTED: uncharacterized protein LOC108460664 [Gossypium arboreum] | 0 |
| Q8CXD3 | Chaperone protein DnaJ OS=Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831) OX=221109 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A0B0P144 | DnaJ subfamily B member 12 OS=Gossypium arboreum OX=29729 GN=F383_23390 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology