Basic Information
Locus ID:
nbisL1-mrna-1172
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 12453861 | 12457527 | - | nbisL1-mrna-1172 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 104,124.25 Da | 37.15 | 93.17 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 611 | 884 | 1.45192E-96 | - |
| Pfam | PF00069 | Protein kinase domain | 606 | 879 | 1.8E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 159 | 2.4E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 342 | 376 | 0.0019 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 399 | 439 | 2.3E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 74 | 7.8E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 446 | 5.1E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 581 | 889 | 2.6E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 683 | 902 | 2.0E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 340 | 464 | 2.6E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 338 | 5.1E-82 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 565 | 682 | 6.3E-37 | - |
| SMART | SM00369 | LRR_typ_2 | 402 | 426 | 34.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 605 | 885 | 6.7E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 123 | 146 | 0.0013 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 221 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 326 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 122 | 390.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 605 | 885 | 39.990044 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 611 | 633 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 730 | 742 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 490 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021657093.1 | receptor protein kinase TMK1-like isoform X1 [Hevea brasiliensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KI27 | Putative receptor protein kinase TMK1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology