Basic Information
Locus ID:
nbisL1-mrna-11655
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002125F_pilon | 715240 | 717603 | + | nbisL1-mrna-11655 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 67,737.75 Da | 36.85 | 89.37 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 480 | 570 | 3.4E-5 | IPR001245 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 76 | 188 | 1.49E-6 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 456 | 587 | 9.27E-15 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 155 | 310 | 3.4E-20 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 156 | 352 | 1.8E-20 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 451 | 542 | 1.0E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 479 | 634 | 9.997698 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 485 | 507 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_034893683.1 | putative serine/threonine-protein kinase-like protein CCR3 [Populus alba] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4V6ACF6 | Protein kinase domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000025290 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology