Basic Information
Locus ID:
nbisL1-mrna-11651
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 18652624 | 18654144 | - | nbisL1-mrna-11651 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.38 | 23,861.03 Da | 48.56 | 65.02 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 182 | 218 | 2.0034E-18 | - |
| Pfam | PF19026 | HYPK UBA domain | 180 | 218 | 4.6E-13 | IPR044034 |
| Pfam | PF01849 | NAC domain | 75 | 130 | 4.3E-21 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 180 | 217 | 3.0E-20 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 81 | 134 | 4.2E-30 | IPR038187 |
| SMART | SM01407 | NAC_2 | 75 | 131 | 2.0E-23 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 72 | 137 | 17.212513 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 32 | - | - |
| Coils | Coil | Coil | 24 | 44 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49470.1 | nascent polypeptide-associated complex subunit alpha-like protein 2. | 0 |
| RefSeq | XP_021280862.1 | nascent polypeptide-associated complex subunit alpha-like protein 2 isoform X2 [Herrania umbratica] | 0 |
| Q94JX9 | Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8J6CL75 | NAC-A/B domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_033252 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology