Basic Information
Locus ID:
nbisL1-mrna-11638
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Serine threonine-protein kinase endoribonuclease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000298F_pilon | 86805 | 87407 | + | nbisL1-mrna-11638 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 16,000.94 Da | 39.26 | 86.16 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 116 | 5.6E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 29 | 118 | 4.0E-21 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17520.1 | Endoribonuclease/protein kinase IRE1-like. Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants. | 0 |
| RefSeq | XP_022740111.1 | serine/threonine-protein kinase/endoribonuclease IRE1a isoform X3 [Durio zibethinus] | 0 |
| Q9C5S2 | Serine/threonine-protein kinase/endoribonuclease IRE1a OS=Arabidopsis thaliana OX=3702 GN=IRE1A PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KIV2 | non-specific serine/threonine protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0614, Ceq01G0618 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10412 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11638 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.560 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23115 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23703 |