Basic Information
Locus ID:
nbisL1-mrna-11618
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 1968931 | 1975994 | + | nbisL1-mrna-11618 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 192,982.52 Da | 48.79 | 67.55 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1444 | 1707 | 3.60721E-146 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 350 | 620 | 5.22887E-123 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 370 | 609 | 3.8E-32 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1483 | 1649 | 1.2E-33 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1437 | 1707 | 1.6E-80 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 416 | 586 | 1.33E-38 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 415 | 586 | 6.3E-50 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1413 | 1564 | 3.0E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1566 | 1708 | 2.8E-41 | - |
| SMART | SM00330 | PIPK_2 | 1419 | 1708 | 1.2E-113 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1387 | 1707 | 59.596451 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 3 | 68 | 8.818125 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1367 | 1389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1360 | 1389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 339 | - | - |
| Coils | Coil | Coil | 982 | 1030 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021647628.1 | LOW QUALITY PROTEIN: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Hevea brasiliensis] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MG65 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology