Basic Information
Locus ID:
nbisL1-mrna-11602
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 18235049 | 18238113 | + | nbisL1-mrna-11602 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 52,174.37 Da | 49.95 | 65.28 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 55 | 193 | 4.9E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 39 | 212 | 5.49E-38 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 63 | 218 | 1.1E-29 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 54 | 212 | 30.615273 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_039051770.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Hibiscus syriacus] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5P2I8 | NAC domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D12G192300v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology