Basic Information
Locus ID:
nbisL1-mrna-1156
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 9480479 | 9481854 | - | nbisL1-mrna-1156 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 37,731.03 Da | 38.94 | 71.27 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 68 | 122 | 2.96682E-16 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 68 | 130 | 7.0E-18 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 62 | 133 | 6.28E-17 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 56 | 142 | 2.8E-17 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 67 | 125 | 1.1E-14 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 68 | 133 | 14.834588 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 110 | 129 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 89 | 104 | 1.9E-6 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 105 | 125 | 1.9E-6 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 70 | 88 | 1.9E-6 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 340 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_039049788.1 | J protein JJJ2-like [Hibiscus syriacus] | 0 |
| Q17438 | DnaJ homolog subfamily B member 1 OS=Caenorhabditis elegans OX=6239 GN=dnj-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2WKF3 | Magnesium transporter NIPA2-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116964pilonHSYRG00427 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology