Basic Information
Locus ID:
nbisL1-mrna-11548
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 1178430 | 1181765 | - | nbisL1-mrna-11548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 102,864.12 Da | 36.61 | 88.80 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 601 | 874 | 1.04607E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 598 | 870 | 3.8E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 337 | 372 | 5.8E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 67 | 9.8E-4 | IPR013210 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 398 | 440 | 3.4E-6 | IPR025875 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 443 | 1.14E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 570 | 882 | 5.06E-81 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 334 | 459 | 4.1E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 673 | 887 | 6.5E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 560 | 672 | 3.1E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 332 | 2.5E-77 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 421 | 443 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 0.017 | IPR003591 |
| SMART | SM00220 | serkin_6 | 595 | 875 | 7.5E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 397 | 420 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 316 | 260.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 595 | 875 | 40.880489 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 601 | 623 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 720 | 732 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 915 | 947 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021641290.1 | receptor protein kinase TMK1-like isoform X1 [Hevea brasiliensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L8F0 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology