Basic Information
Locus ID:
nbisL1-mrna-11494
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
SAE1A
Description:
SUMO-activating enzyme subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 17244510 | 17247690 | - | nbisL1-mrna-11494 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 35,436.52 Da | 35.76 | 93.54 | -0.10 |
Protein Domain:
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50580.2 | SUMO-activating enzyme 1B. Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein. | 0 |
| RefSeq | XP_039052148.1 | SUMO-activating enzyme subunit 1B-1-like [Hibiscus syriacus] | 0 |
| P0DI12 | SUMO-activating enzyme subunit 1B-1 OS=Arabidopsis thaliana OX=3702 GN=SAE1B-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J9LWX9 | ThiF domain-containing protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_019494 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg25603 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14000 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034344 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_2g035030, BVRB_9g209420 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg20565, Sbi_jg23199 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg17031 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009150 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl63477, Sgl67954 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000018279, gene:ENSEOMG00000020553 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0013170, CQ.Regalona.r1.2BG0015110 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30012020 |
| Apiaceae | Apium graveolens | 1 | Ag10G00216 |
| Arecaceae | Cocos nucifera | 1 | scaffold004463G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103721214 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.1093.V1.1, AsparagusV1_04.2687.V1.1 ... |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G13229 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT4G24940.1, AT5G50580.2, AT5G50680.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10025730m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g12760.v2.2, Sp7g22920.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g012940.2N, BniB05g012320.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G2022 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G2195 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g03840 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0039s00016.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 5 | gene.Thate02g02420, gene.Thate02g16040, gene.Thate03g11920 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11494 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.638 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00041575 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb5G27198, Lb8G35781 |
| Poaceae | Echinochloa crus-galli | 3 | AH04.1306, BH04.1305, CH04.1489 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0298650, gene-QOZ80_4BG0329350 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0233390.1, HORVU.MOREX.r3.7HG0719070.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_042709 |
| Poaceae | Oryza coarctata | 2 | Oco21G005960, Oco22G007000 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g30410.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G142000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0303654, Pt_Chr0303663 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr23G000400, Chr25G000330, Chr30G000030 |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G158500, Tel7E01G634000 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC3AG010810, gene_TRIDC3BG014690 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS3A02G090000.1, TraesCS3B02G105300.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb169400_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-23251, nbis-gene-6250 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g20730, Zma_g22275 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG01.2782 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g12850 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.1145, evm.TU.Scaffold_4_RagTag.342 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12342, nbisL1-mrna-29033 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-18698 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-12723, nbisL1-mrna-1964 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000008l.218, evm.TU.utg000010l.215 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00000180, Maker00008509 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-650 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-8796 |
| Salicaceae | Populus euphratica | 2 | populus_peu28884, populus_peu30282 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132601947, gene-LOC132632460 |
| Solanaceae | Solanum chilense | 2 | SOLCI004215400, SOLCI004571100 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107012363, gene-LOC107021642 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.19825_chr07_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G2647 |
| Zosteraceae | Zostera marina | 1 | Zosma04g14180.v3.1 |