Basic Information
Locus ID:
nbisL1-mrna-11486
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002122F_pilon | 3475697 | 3481192 | - | nbisL1-mrna-11486 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 68,029.77 Da | 40.29 | 85.98 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 156 | 198 | 3.8E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 3.5E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 410 | 566 | 5.7E-26 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 234 | 2.87E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 593 | 1.84E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 487 | 567 | 2.4E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 249 | 1.2E-50 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 369 | 485 | 1.7E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 161 | 184 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 207 | 96.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 160 | 14.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 408 | 619 | 26.265932 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 140 | 153 | 2.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 161 | 174 | 2.8E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 368 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_021681657.1 | protein STRUBBELIG-RECEPTOR FAMILY 5 [Hevea brasiliensis] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067JYE7 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_22565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology