Basic Information
Locus ID:
nbisL1-mrna-11480
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002122F_pilon | 3409113 | 3411320 | - | nbisL1-mrna-11480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 72,538.24 Da | 34.69 | 90.87 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 127 | 187 | 6.8E-12 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 5.5E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 357 | 621 | 1.6E-30 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 236 | 3.4E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 626 | 5.68E-49 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 244 | 1.0E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 147 | 6.8E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 641 | 9.9E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 427 | 8.0E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 635 | 27.311848 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034899585.1 | pollen receptor-like kinase 4 [Populus alba] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2X522 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_023784 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology