Basic Information
Locus ID:
nbisL1-mrna-1148
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 7173500 | 7176782 | - | nbisL1-mrna-1148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 71,051.79 Da | 42.60 | 94.12 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 78 | 9.0E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 188 | 7.1E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 354 | 614 | 3.0E-35 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 220 | 2.84E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 615 | 1.22E-59 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 425 | 2.3E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 148 | 7.4E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 426 | 643 | 1.7E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 239 | 9.8E-19 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 351 | 635 | 31.523779 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 357 | 379 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 656 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 656 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021592118.1 | probable inactive receptor kinase At1g48480 [Manihot esculenta] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251M111 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G118900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology