Basic Information
Locus ID:
nbisL1-mrna-11367
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 5216566 | 5220114 | - | nbisL1-mrna-11367 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 56,652.02 Da | 59.84 | 51.73 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 242 | 297 | 6.1E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 413 | 469 | 1.3E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 404 | 472 | 1.24E-28 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 239 | 299 | 2.48E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 226 | 300 | 1.4E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 397 | 473 | 1.5E-34 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 240 | 298 | 6.6E-36 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 412 | 471 | 3.1E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 235 | 299 | 22.297207 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 407 | 472 | 37.194874 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 514 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021651262.1 | probable WRKY transcription factor 3 isoform X1 [Hevea brasiliensis] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2C9VWJ7 | WRKY transcription factor 3 OS=Manihot esculenta OX=3983 GN=MANES_05G106900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology