Basic Information
Locus ID:
nbisL1-mrna-11300
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002122F_pilon | 2156630 | 2158235 | + | nbisL1-mrna-11300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 21,290.53 Da | 41.44 | 92.05 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021666738.1 | E3 ubiquitin-protein ligase UPL5-like [Hevea brasiliensis] | 0 |
| TrEMBL | A0A2P2JYY0 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_21971 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17924 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000018l.309 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17998 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11300 |