Basic Information
Locus ID:
nbisL1-mrna-11284
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 15194425 | 15195001 | - | nbisL1-mrna-11284 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 17,532.92 Da | 22.91 | 88.53 | 0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 24 | 122 | 5.66908E-43 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 113 | 5.4E-24 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 22 | 123 | 1.29E-30 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 21 | 125 | 2.5E-33 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 23 | 124 | 36.55954 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32300.1 | uclacyanin 1. Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods. | 0 |
| RefSeq | XP_039052008.1 | blue copper protein 1a-like [Hibiscus syriacus] | 0 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A2WH89 | Phytocyanin domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116996pilonHSYRG00505 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology