Basic Information
Locus ID:
nbisL1-mrna-11280
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Phosphatidylinositol 4-kinase gamma
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000062F_pilon | 2882615 | 2883818 | + | nbisL1-mrna-11280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 42,011.85 Da | 28.32 | 88.77 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 112 | 169 | 3.75862E-4 | - |
| Pfam | PF00240 | Ubiquitin family | 112 | 170 | 4.5E-5 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 256 | 356 | 4.7E-14 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 43 | 106 | 2.4E-15 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 34 | 107 | 2.3E-15 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 107 | 171 | 4.14E-8 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 112 | 188 | 1.4E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 33 | 111 | 5.5E-14 | - |
| SMART | SM00213 | ubq_7 | 34 | 105 | 3.4E-5 | IPR000626 |
| SMART | SM00213 | ubq_7 | 110 | 186 | 1.7 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 112 | 169 | 10.026781 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 32 | 105 | 14.01168 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 86 | 107 | 9.6E-6 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 43 | 63 | 9.6E-6 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.3 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_021664787.1 | phosphatidylinositol 4-kinase gamma 4-like [Hevea brasiliensis] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JFP2 | 1-phosphatidylinositol 4-kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology