Basic Information
Locus ID:
nbisL1-mrna-11225
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000062F_pilon | 2549804 | 2554481 | + | nbisL1-mrna-11225 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 56,149.61 Da | 36.91 | 89.26 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 194 | 460 | 2.59479E-100 | - |
| Pfam | PF00069 | Protein kinase domain | 190 | 457 | 4.7E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 172 | 465 | 2.02E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 169 | 263 | 9.4E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 264 | 477 | 1.2E-64 | - |
| SMART | SM00220 | serkin_6 | 188 | 459 | 5.2E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 188 | 467 | 39.22681 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 194 | 217 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 310 | 322 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 503 | - | - |
| Coils | Coil | Coil | 208 | 228 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_007048877.2 | PREDICTED: probable receptor-like protein kinase At2g42960 [Theobroma cacao] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2MM81 | ATP binding protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology