Basic Information
Locus ID:
nbisL1-mrna-11221
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 14649610 | 14651611 | - | nbisL1-mrna-11221 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.20 | 23,863.58 Da | 48.00 | 84.49 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 112 | 170 | 1.2E-5 | IPR000210 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 90 | 216 | 1.7E-6 | IPR011333 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_038991302.1 | BTB/POZ domain-containing protein POB1-like [Hibiscus syriacus] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A3B9W9 | BTB/POZ domain-containing protein POB1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110226pilonHSYRG00037 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g187400 |
| Brassicaceae | Brassica nigra | 1 | BniB08g041430.2N |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11221 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00028356, Pov_00028402, Pov_00028412 |
| Poaceae | Thinopyrum elongatum | 5 | Tel5E01G694100, Tel5E01G694400, Tel5E01G787700 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG063870, gene_TRIDC4AG054000 |
| Poaceae | Triticum aestivum | 2 | TraesCS4A02G362100.2, TraesCS5D02G511000.1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-35424 |
| Salicaceae | Populus euphratica | 1 | populus_peu34485 |