Basic Information
Locus ID:
nbisL1-mrna-1121
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 11781747 | 11785998 | - | nbisL1-mrna-1121 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 76,854.55 Da | 49.54 | 90.01 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 21 | 145 | 7.95887E-12 | - |
| Pfam | PF00582 | Universal stress protein family | 19 | 146 | 1.3E-8 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 357 | 563 | 4.5E-43 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 21 | 147 | 1.09E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 624 | 6.7E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 428 | 5.6E-29 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 19 | 156 | 5.5E-9 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 643 | 3.1E-58 | - |
| SMART | SM00220 | serkin_6 | 354 | 613 | 1.6E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 354 | 630 | 34.647392 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 475 | 487 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 360 | 382 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63940.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_011022896.1 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 [Populus euphratica] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2M019 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology