HalophFGD

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Basic Information
Locus ID: nbisL1-mrna-11178
Species & Taxonomic ID: Carallia pectinifolia & 98586
Genome Assembly: GCA_037832335.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr05 9660197 9662981 - nbisL1-mrna-11178
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.03 15,499.60 Da 40.04 83.53 0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08268 F-box associated domain 12 102 7.3E-9 IPR013187
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 12 131 1.2E-10 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_050218358.1 F-box protein At3g07870-like isoform X2 [Mercurialis annua] 0
TrEMBL A0A2P2IL21 FBA_3 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_13_RagTag.149
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-10871, nbisL1-mrna-11178, nbisL1-mrna-29578 ...
nbisL1-mrna-29866
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