Basic Information
Locus ID:
nbisL1-mrna-11165
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002122F_pilon | 1366859 | 1370051 | - | nbisL1-mrna-11165 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 53,379.48 Da | 47.52 | 80.50 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 256 | 353 | 1.69E-10 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 244 | 325 | 1.1E-13 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 276 | 298 | - | IPR017441 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021692695.1 | - | 0 |
| Q9LV48 | Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5QHM5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G0856 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G0937 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-8921 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.182 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.1319 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-31886, nbisL1-mrna-31892 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1488 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-15330 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000018l.446 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00003168 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3304 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11165 |
| Salicaceae | Populus euphratica | 3 | populus_peu15376, populus_peu15377, populus_peu33029 |