Basic Information
Locus ID:
nbisL1-mrna-11139
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002122F_pilon | 1062676 | 1067386 | + | nbisL1-mrna-11139 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 65,982.35 Da | 37.39 | 69.73 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 24 | 154 | 1.22631E-45 | IPR033734 |
| CDD | cd09612 | Jacalin | 256 | 383 | 2.16217E-38 | IPR033734 |
| CDD | cd09612 | Jacalin | 452 | 581 | 3.47562E-39 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 26 | 155 | 7.9E-33 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 255 | 383 | 4.9E-29 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 449 | 581 | 4.2E-31 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 13 | 155 | 7.33E-44 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 438 | 580 | 2.88E-42 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 242 | 382 | 1.15E-38 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 433 | 581 | 1.0E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 228 | 383 | 1.1E-46 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 5 | 153 | 6.6E-56 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 253 | 384 | 2.1E-37 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 449 | 582 | 1.5E-44 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 24 | 155 | 9.5E-42 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 242 | 384 | 48.77916 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 438 | 582 | 47.897514 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 13 | 155 | 51.236507 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021636642.1 | jacalin-related lectin 3-like [Hevea brasiliensis] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2IXV7 | Pentatricopeptide repeat-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology