Basic Information
Locus ID:
nbisL1-mrna-11069
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 3969374 | 3975638 | + | nbisL1-mrna-11069 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 94,506.61 Da | 38.05 | 89.03 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 634 | 719 | 2.7E-15 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 1.2E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 798 | 2.74E-27 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 407 | 8.5E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 604 | 706 | 2.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 189 | 1.3E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 711 | 818 | 1.0E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 289 | 9.8E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 438 | 6.4E-13 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 631 | 863 | 14.690187 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 272 | 294 | 7.388525 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 637 | 659 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 807 | 863 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011012973.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X3 [Populus euphratica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A837A7P1 | Leucine-rich repeat transmembrane protein OS=Salix suchowensis OX=1278906 GN=IMY05_004G0176800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology