Basic Information
Locus ID:
nbisL1-mrna-11028
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 7724515 | 7731793 | + | nbisL1-mrna-11028 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 31,771.42 Da | 53.90 | 81.34 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 131 | 186 | 4.1E-6 | IPR001245 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 244 | 284 | 1.2E-8 | IPR021820 |
| Pfam | PF00954 | S-locus glycoprotein domain | 41 | 90 | 4.9E-7 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 114 | 213 | 4.28E-17 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 93 | 189 | 2.2E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 129 | 284 | 8.824576 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 284 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27290.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_021654832.1 | - | 0 |
| O81832 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 | 0 | |
| TrEMBL | A0A2H5PKU8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-11028 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000006l.175, add.evm.TU.utg000006l.176 |