Basic Information
Locus ID:
nbisL1-mrna-10957
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002113F_pilon | 3342623 | 3346180 | + | nbisL1-mrna-10957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 64,136.42 Da | 49.62 | 82.94 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 155 | 252 | 3.7E-13 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 278 | 371 | 2.4E-9 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 454 | 565 | 1.9E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 150 | 252 | 2.35E-12 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 292 | 393 | 2.1E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 137 | 291 | 6.6E-17 | IPR011333 |
| SMART | SM00225 | BTB_4 | 157 | 255 | 6.3E-10 | IPR000210 |
| SMART | SM00875 | BACK_2 | 270 | 372 | 1.4E-8 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 155 | 224 | 12.681111 | IPR000210 |
| Coils | Coil | Coil | 81 | 101 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_012086784.1 | BTB/POZ domain-containing protein POB1 [Jatropha curcas] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2JC08 | Uncharacterized protein MANES_02G013900 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology