Basic Information
Locus ID:
nbisL1-mrna-10948
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002113F_pilon | 3263436 | 3268872 | - | nbisL1-mrna-10948 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 99,804.65 Da | 44.56 | 90.09 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 584 | 717 | 4.74593E-24 | - |
| Pfam | PF17862 | AAA+ lid domain | 740 | 780 | 2.9E-9 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 586 | 716 | 8.0E-39 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 546 | 783 | 2.64E-60 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 718 | 824 | 8.2E-95 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 545 | 830 | 8.2E-95 | IPR027417 |
| SMART | SM00382 | AAA_5 | 582 | 719 | 1.9E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 689 | 708 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 256 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_021679373.1 | transitional endoplasmic reticulum ATPase homolog 2-like isoform X5 [Hevea brasiliensis] | 0 |
| Q7ZZ25 | Outer mitochondrial transmembrane helix translocase OS=Danio rerio OX=7955 GN=atad1a PE=2 SV=2 | 0 | |
| TrEMBL | A0A2N9GU64 | AAA domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31017 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology