Basic Information
Locus ID:
nbisL1-mrna-10911
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002113F_pilon | 2994583 | 2996983 | - | nbisL1-mrna-10911 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 50,335.35 Da | 40.65 | 84.54 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02214 | BTB/POZ domain | 21 | 99 | 4.4E-7 | IPR003131 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 113 | 347 | 3.57E-9 | IPR036322 |
| SUPERFAMILY | SSF54695 | POZ domain | 20 | 98 | 2.69E-8 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 18 | 101 | 3.8E-11 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 123 | 458 | 1.4E-7 | IPR015943 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_002509821.1 | BTB/POZ domain-containing protein At5g41330 [Ricinus communis] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2J5L7 | Potassium channel tetramerization domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology