Basic Information
Locus ID:
nbisL1-mrna-10899
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002113F_pilon | 2913983 | 2920577 | + | nbisL1-mrna-10899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 115,416.78 Da | 48.81 | 86.12 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 12 | 110 | 1.1E-6 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 403 | 745 | 4.7E-101 | IPR001752 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 11 | 108 | 2.75E-13 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 397 | 785 | 4.32E-116 | IPR027417 |
| Gene3D | G3DSA:1.10.418.10 | - | 8 | 113 | 1.9E-12 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 392 | 788 | 4.5E-126 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 395 | 755 | 4.8E-156 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 397 | 747 | 110.665298 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 8 | 111 | 13.576975 | IPR001715 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 647 | 658 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 472 | 493 | 6.1E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 697 | 718 | 6.1E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 617 | 634 | 6.1E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 648 | 666 | 6.1E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 840 | 857 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 992 | 1029 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 810 | 831 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 806 | 831 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 948 | 1035 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 838 | 857 | - | - |
| Coils | Coil | Coil | 204 | 245 | - | - |
| Coils | Coil | Coil | 754 | 781 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_024446862.2 | kinesin-like protein KIN-14J isoform X2 [Populus trichocarpa] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JHT8 | Uncharacterized protein MANES_02G021900 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology